• Antibiotic resistance in foodborne pathogens

      Duffy, Geraldine; Walsh, Ciara (Teagasc, 2005-02)
      Wide-spread antibiotic resistance among bacterial pathogens is now a serious public health issue and multi-antibiotic resistance has been reported in many foodborne pathogens including Salmonella and E. coli.
    • Fermented beverages with health-promoting potential: Past and future perspectives

      Marsh, Alan J.; Hill, Colin; Ross, R. Paul; Cotter, Paul D. (Elsevier, 2014-05-20)
      Highlights • Traditional fermented beverages are reviewed. • Microbiology and probiotic potential of beverages are considered. • Recent developments in novel probiotic beverage production. • Beverages produced from a number of different substrates are explored. • Review of enchancements (prebiotics, flavours and neutraceuticals). Fermentation is an ancient form of food preservation, which also improves the nutritional content of foods. In many regions of the world, fermented beverages have become known for their health-promoting attributes. In addition to harnessing traditional beverages for commercial use, there have recently been innovative efforts to develop non-dairy probiotic fermented beverages from a variety of substrates, including soy milk, whey, cereals and vegetable and fruit juices. On the basis of recent developments, it is anticipated that fermented beverages will continue to be a significant component within the functional food market.
    • Irish domestic food safety knowledge, practice and microbiology with particular emphasis on staphylococcus aureus

      Bolton, Declan J.; Kennedy, Jean; Cowan, Cathal (Teagasc, 2005-06)
      This study examined consumer food safety knowledge on the island of Ireland. Domestic refrigerators were tested for the presence of a range of pathogenic bacteria. The effect of refrigerated storage on the antibiotic resistance and thermal resistance of S . aureus were also investigated. Irish consumers displayed a considerable lack of knowledge about correct refrigeration temperatures and proper hygiene procedures to prevent crosscontamination in the kitchen. Domestic refrigerators were contaminated with a range of bacterial pathogens including S . aureus (41%), S almonella spp. (7%), E scherichia. coli (6%), L isteria monocytogenes (6%) and Y ersinia enterocolitica (2%). Viewing Options
    • Proteomics as the final step in the functional metagenomics study of antimicrobial resistance

      Fouhy, Fiona; Stanton, Catherine; Cotter, Paul D; Hill, Colin; Walsh, Fiona (Frontiers Media S. A., 2015-03-03)
      The majority of clinically applied antimicrobial agents are derived from natural products generated by soil microorganisms and therefore resistance is likely to be ubiquitous in such environments. This is supported by the fact that numerous clinically important resistance mechanisms are encoded within the genomes of such bacteria. Advances in genomic sequencing have enabled the in silico identification of putative resistance genes present in these microorganisms. However, it is not sufficient to rely on the identification of putative resistance genes, we must also determine if the resultant proteins confer a resistant phenotype. This will require an analysis pipeline that extends from the extraction of environmental DNA, to the identification and analysis of potential resistance genes and their resultant proteins and phenotypes. This review focuses on the application of functional metagenomics and proteomics to study antimicrobial resistance in diverse environments.
    • A quantitative risk assessment of E.coli 0157:H7 in Irish minced beef

      Duffy, Geraldine; O'Brien, Stephen; Carney, Eimear; Butler, Francis; Cummins, Enda; Nally, Padraig; Mahon, Denise; Henchion, Maeve; Cowan, Cathal (Teagasc, 2005-02)
      A national quantitative risk assessment was undertaken for minced beef in the Republic of Ireland. The objective was to estimate the probability of E. coli O157:H7 infection from consumption of Irish beef and to investigate the parts of the beef chain contributing most to the risk posed by this pathogen.The quantitative risk assessment was broken into 3 main modules: 1) production of boxed beef trimmings; 2) processing of trimmings and burger formation and 3) retail/domestic consumption phase. Key points in each module (beef hide, beef trimmings and beef products at retail) were validated using data derived from microbiology sampling at beef abattoirs, supermarkets and butchers’ shops in Ireland.
    • A risk assessment and hazard analysis and critical control point (HACCP) study for the Irish catering industry

      Bolton, Declan J.; Meally, Aisling; Downey, Gerard (Teagasc, 2007-02)
      This report provides details of a food safety knowledge survey, a microbiological survey, a chilled temperature survey and an audit conducted in 200 restaurants throughout the island of Ireland. The results suggest a low incidence of several bacterial pathogens (including Salmonella enterica) and identify areas in which food safety knowledge, procedures and practices should be improved. Salmonella enterica isolates were characterised and the results suggested distinct pockets of different serotypes. Growth curves for L. monocytogenes isolates suggest considerably reduced shelf-life for a variety of foods. For example, lettuce should not be stored at room temperature or the shelf-life is reduced from 6.5 days (chilled storage) to 3.3 days.The predicted shelf-life for fresh milk was 4.5 days (chilled storage). Chlorine (sodium hypochlorite, 5 ppm), 1-monolauroyl-rac-glycerol and a laurate ester (ester-glucoside laurate) were also tested for application as vegetable decontaminating agents in restaurant kitchens. The report concludes with recommendations for improved food safety and hygiene in Irish restaurants.
    • Routine diagnostic tests for food-borne pathogens

      Duffy, Geraldine; Kilbride, Brendan; Fitzmaurice, Justine; Sheridan, James J. (Teagasc, 2001-01)
      Rapid techniques were developed and applied to the determination of total viable bacteria and to the detection of food borne pathogens (Listeria monocytogenes, Salmonella, Campylobacter jejuni and E. coli O157:H7). The method developed for total viable counts is based on membrane filtration and fluorescent staining and the technique can be performed and a result obtained within 20 min. The results correlate well with the standard plate count and the technique is now being implemented in Irish food factories.
    • A test bacterial decontamination system for meat products

      Ward, Oonagh C.; Logue, Catherine M.; Sheridan, James J. (Teagasc, 2000-12)
      A pilot scale apparatus was designed to allow meat samples to be treated with steam at sub-atmospheric pressures and correspondingly reduced temperatures. Experiments were carried out to determine the effectiveness of sub-atmospheric steam decontamination in eliminating bacteria on the surface of fresh beef. This type of treatment can have special advantages in that steam can be produced at temperatures well below 100ºC. This means that the heat advantages of steam as a decontaminating agent can potentially be obtained at lower temperatures.