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Physiological and Transcriptional Response to Drought Stress Among Bioenergy Grass Miscanthus Species

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Keywords
Differentially expressed genes (DEGs), drought, electrolyte leakage, gene ontology, Miscanthus, relative water content, RNA-seq
Date
2020-07-28
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Crop Science
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URI
http://hdl.handle.net/11019/2488
Citation
De Vega, J.J., Teshome, A., Klaas, M. et al. Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species. Biotechnol Biofuels 14, 60 (2021). https://doi.org/10.1186/s13068-021-01915-z
Abstract
Background: Miscanthus is a commercial lignocellulosic biomass crop owing to its high biomass productivity, particularly in the temperate regions. This study was conducted to elucidate physiological and molecular responses of four Miscanthus species subjected to well-watered and droughted greenhouse conditions. Results: A signicant biomass loss was observed under drought conditions for all genotypes. A sterile M. x giganteus showed a lower reduction in biomass yield under drought conditions compared to the control than the other species. Under well-watered conditions, biomass yield was as good as or better than control conditions in all species tested. M. sinensis was more tolerant than M. sacchariorus to both water stress conditions. 4,389 of the 67,789 genes (6.4%) in the reference genome were differentially expressed among four Miscanthus species. Most of the genes were differentially expressed in a single species, but the enrichment analysis of gene ontology (GO) terms revealed that the same biological processes were regulated in all the species during stress conditions. Namely, upregulated differentially expressed genes were signicantly involved in sucrose and starch metabolism, redox, and water and glycerol homeostasis and channel activity. Multiple copies of starch metabolic enzymes BAM and waxy GBSS-I were strongly up-regulated in drought stress in all Miscanthus genotypes. Twelve aquaporins (PIP1, PIP2 and NIP2) were also up-regulated in drought stress across genotypes. On the other hand, downregulated differentially expressed genes were signicantly involved in protein kinase activity, cell receptor signalling and phosphorylation. Conclusions: Findings in the present study can assist in implementing molecular breeding approaches of drought resistant Miscanthus and its domestication.
Funder
European Union
Grant Number
FP7-KBBE-2011-5-289461
CLNE/2017/364
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