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dc.contributor.authorRamírez-Tejero, Jorge A.
dc.contributor.authorJiménez-Ruiz, Jaime
dc.contributor.authorLeyva-Pérez, María de la O
dc.contributor.authorBarroso, Juan Bautista
dc.contributor.authorLuque, Francisco
dc.date.accessioned2021-07-21T15:47:46Z
dc.date.available2021-07-21T15:47:46Z
dc.date.issued2020-05-12
dc.identifier.citationRamírez-Tejero, J.A.; Jiménez-Ruiz, J.; Leyva-Pérez, M.O.; Barroso, J.B.; Luque, F. Gene Expression Pattern in Olive Tree Organs (Olea europaea L.). Genes 2020, 11, 544. https://doi.org/10.3390/genes11050544en_US
dc.identifier.issn2073-4425
dc.identifier.urihttp://hdl.handle.net/11019/2500
dc.descriptionpeer-revieweden_US
dc.description.abstractThe olive tree (Olea europaea L.) was one of the first plant species in history to be domesticated. Throughout olive domestication, gene expression has undergone drastic changes that may affect tissue/organ-specific genes. This is an RNA-seq study of the transcriptomic activity of different tissues/organs from adult olive tree cv. “Picual” under field conditions. This analysis unveiled 53,456 genes with expression in at least one tissue, 32,030 of which were expressed in all organs and 19,575 were found to be potential housekeeping genes. In addition, the specific expression pattern in each plant part was studied. The flower was clearly the organ with the most exclusively expressed genes, 3529, many of which were involved in reproduction. Many of these organ-specific genes are generally involved in regulatory activities and have a nuclear protein localization, except for leaves, where there are also many genes with a plastid localization. This was also observed in stems to a lesser extent. Moreover, pathogen defense and immunity pathways were highly represented in roots. These data show a complex pattern of gene expression in different organs, and provide relevant data about housekeeping and organ-specific genes in cultivated olive.en_US
dc.language.isoenen_US
dc.publisherMDPI AGen_US
dc.relation.ispartofseriesGenes;11
dc.rightsAttribution-ShareAlike 3.0 United States*
dc.rights.urihttp://creativecommons.org/licenses/by-sa/3.0/us/*
dc.subjectRNA-seqen_US
dc.subjectplant organsen_US
dc.subjecttranscriptomeen_US
dc.subjecthousekeeping genesen_US
dc.titleGene Expression Pattern in Olive Tree Organs (Olea europaea L.)en_US
dc.typeArticleen_US
dc.identifier.doihttps://doi.org/10.3390/genes11050544
dc.contributor.sponsorRegional Government of Andalusiaen_US
dc.contributor.sponsorSpanish Ministry of Economy, Industry and Competitivenessen_US
dc.contributor.sponsorSpanish State Research Agencyen_US
dc.contributor.sponsorEuropean Unionen_US
dc.contributor.sponsorGrantNumberAGR-6038en_US
dc.contributor.sponsorGrantNumberAGL2016-75729-C2-1-Ren_US
dc.contributor.sponsorGrantNumberAGL2016-75729-C2-2-Ren_US
dc.source.volume11
dc.source.issue5
dc.source.beginpage544
refterms.dateFOA2021-07-21T15:47:47Z


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