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    Variation in sequences containing microsatellite motifs in the perennial biomass and forage grass, Phalaris arundinacea (Poaceae)

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    Author
    Barth, Susanne cc
    Jankowska, Marta J
    Hodkinson, Trevor R
    Vellani, Tia
    Klaas, Manfred
    Keyword
    Poaceae
    Microsatellite markers
    Phalaris arundinacea
    Reed canary grass
    SSR
    Date
    22/03/2016
    
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    URI
    http://hdl.handle.net/11019/954
    Citation
    Susanne Barth, Marta Jolanta Jankowska, Trevor Roland Hodkinson, Tia Vellani and Manfred Klaas. Variation in sequences containing microsatellite motifs in the perennial biomass and forage grass, Phalaris arundinacea (Poaceae). BMC Research Notes. 2016 Mar 22;9(1):184. DOI 10.1186/s13104-016-1994-6
    Abstract
    Forty three microsatellite markers were developed for further genetic characterisation of a forage and biomass grass crop, for which genomic resources are currently scarce. The microsatellite markers were developed from a normalized EST-SSR library. All of the 43 markers gave a clear banding pattern on 3 % Metaphor agarose gels. Eight selected SSR markers were tested in detail for polymorphism across eleven DNA samples of large geographic distribution across Europe. The new set of 43 SSR markers will help future research to characterise the genetic structure and diversity of Phalaris arundinacea, with a potential to further understand its invasive character in North American wetlands, as well as aid in breeding work for desired biomass and forage traits. P. arundinacea is particularly valued in the northern latitude as a crop with high biomass potential, even more so on marginal lands.
    Funder
    European Union
    Grant Number
    KBBE-2011-5-289461).
    Collections
    Crop Science
    Teagasc publications in Biomed Central
    Teagasc publications in Biomed Central
    Teagasc publications in Biomed Central

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